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Description of the server:

Mumps Virus (MuV) genotyping server assigns genotype to query sequence(s) of small hydrophobic (SH) gene.  The server uses two conventional methods viz., BLAST, molecular phylogeny analysis (MPA) and a novel method based on Return Time Distribution (RTD), which is developed in-house.


Go to Combined analysis based genotyping (by BLAST, Phylogeny and RTD) 

Go to BLAST-based genotyping

Go to Phylogeny-based genotyping

Go to RTD-based genotyping

Citation information:

Kolekar PS, Kale M, Kulkarni-Kale U: Genotyping of Mumps viruses based on SH gene: Development of a server using alignment-free 
and alignment-based methods. Immunome Res. 2011. 7(3):1-7. [Publisher's full text: Available here]

Also Visit: 
CEP : Conformational Epitope Prediction Server
AgAbDb : Antigen Antibody Interaction Database
  Visit RTD based servers
ViPS : Viral Protein Structure Resource


Mumps virus genotyping server has been developed at Bioinformatics Centre, Savitribai Phule Pune University
funded by Department of Biotechnology, Government of India under Centre of Excellence (CoE) grant.


 © Bioinformatics Centre, Savitribai Phule Pune University, India