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Datasets

Reference dataset here . The phylogenetic tree obtained for this dataset using RTD-based method at k=4 is available from here. It is shown as Figure 2 in the manuscript.

Test dataset 1 here

Test dataset 2 here

True negative dataset here

The phylogenetic tree for the combined reference and test datasets (excluding unassigned sequences) obtained using RTD at k=4 is available from here (shown as Figure 3 in the manuscript) and that obtained using Maximum likelihood method is available from here.

Reference Dataset of Mumps Virus Strains  (Test dataset 1 here ; Test dataset 2 here; True negative dataset here)

Test Dataset 1 of Mumps Virus Strains  (Reference dataset here ; Test dataset 2 here ; True negative dataset here )

    *: Genotype information as per the annotation in GenBank record.

Test Dataset 2 of Mumps Virus Strains  ( Reference dataset here ; Test dataset 1 here ; True negative dataset here)

    ^¶: Genotype as predicted by BLAST similarity search against reference dataset with A-L genotypes.

    The entries highlighted in gray are previously unassigned sequences.

True negative dataset   ( Reference dataset here ; Test dataset 1 here ; Test dataset 2 here)

Color coding as following;

Orange : Non-MuV SH genes

Green : Non-SH MuV genes. In this case for each of the non-SH gene, the start and end regions (of ~316 bp) were used separately for testing.

Magenta : Non-MuV non-SH genes