Kolekar P, Kale M, Kulkarni-Kale U: `Inter-Arrival Time' Inspired Algorithm and its Application in Clustering and Molecular Phylogeny. American Institute of Physics Conf Proc. 2010, 1298(1):307-312. [Abstract]
The server uses the Neighbor program of PHYLIP package to reconstruct the phylogenetic tree (Newick file) from the distance matrix generated by RTD based program. The copyright and other details of PHYLIP package are available at
Felsenstein, J. 2005. PHYLIP (Phylogeny Inference Package) version 3.6. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle.
Felsenstein, J. 1989. PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics 5: 164-166.
The server uses the FigTree.jar program to generate the PDF from Newick tree file generated by Neighbor program.
The copyright and other details of FigTree are available at http://tree.bio.ed.ac.uk/software/figtree/