Database of 2313 Experimentally Validated Allergens
Data for Rotavirus VP4

0  1  0  0  1  1  0  0  1 
Completeness Index: Denotes availibility of data for the allergen in Binary format
1: data available
0: data not available
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AllerBase IDAB_V_01608Allergen NameRotavirus VP4
Source OrganismRotavirus A ()KingdomVirus
Biological Function/RoleCapsid proteinMode of Exposure

Assays/Methods used for Experimental Characterization (Read More)

  :  Data Available    : Data not Available

Biological assay / test IgE assay / test Physicochemical test Cell-based assay
Basophil/Mast cell/Histamine Test EAST Chromatography Lymphocyte proliferation assay 
Bronchial Test ELISA  (Reference/s)Isoelectrofocusing 
Conjunctival Test Crossed immunoelectrophoresis Mass spectrometry (MS) 
Nasal Test Fluorescence Immunoassay N-terminal sequencing/sequence analysis 
Oral Test Immunochemiluminescent assay 
Passive Cutaneous Anaphylaxis (PCA) ImmunoCAP Test 
Skin Test Microarray 
Radio Immunoassay  (Reference/s)
RAST 
Western/Immunoblot 

Isoallergen/Variant for Rotavirus VP4:Not Available

Allergen Common Name GenBank Nucleotide NCBI Protein (GenPept) UniProtKB RCSB-PDB (Click on the PDB id to view structure) ETR (Evolutionary Trace analysis Report)
Rotavirus VP4Outer capsid protein VP4
M18736.1  (View Sequence)AAA47345.1  (View Sequence)P12473  (View Sequence)1KQR  1KRI  1SLQ  
2B4H  2B4I  2P3I  
2P3J  2P3K  3TB0  
1kqr  1kri  1slq  
2b4h  2b4i  2p3i  
2p3j  2p3k  3tb0  

Sequence Analysis

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  • Pairwise alignment
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  • BLAST Nucleotide/Protein sequence of Allergen Rotavirus VP4 with Nucleotide or Protein sequences in AllerBase:
    Select GenBank or UniprotKB accession number by clicking on the checkbox in the above table  

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  • Align Nucleotode/Protein sequence of Your choice with Nucleotode or Protein sequence of Allergen Rotavirus VP4:  (Alignment job will be redirected to EMBL-EMBOSS Water or Needle tool)

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Cross-links to Allergen Databases

IUIS-
Allergome-
AllFam-

IgE Epitope Data

No Epitope Data Available

IgE Antibody Data


No IgE Antibody Data Available

Cross-reactivity Data

Allergen Cross-reactive Allergens Reference
Rotavirus VP4Par o 1   (View AllerBase Entry)12757452