AllerBase Allergen Database

Data for Lit v 3

WHO/IUIS recognized Allergen

0 1 1 0 1 0 1 0 1

Completeness Index: Denotes availibility of data for the allergen in Binary format
1: data available
0: data not available

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AllerBase ID	AB_A_01115	Allergen Name	Lit v 3
Source Organism	Litopenaeus vannamei (Whiteleg shrimp)	Kingdom	Animal
Biological Function/Role	Muscle component	Mode of Exposure	Ingestion

Assays/Methods used for Experimental Characterization (Read More)

: Data Available

: Data not Available

Biological assay / test	IgE assay / test	Physicochemical test	Cell-based assay
Basophil/Mast cell/Histamine Test	EAST	Chromatography	Lymphocyte proliferation assay
Bronchial Test	ELISA	Isoelectrofocusing
Conjunctival Test	Crossed immunoelectrophoresis	Mass spectrometry (MS) (Reference/s)
Nasal Test	Fluorescence Immunoassay	N-terminal sequencing/sequence analysis
Oral Test	Immunochemiluminescent assay
Passive Cutaneous Anaphylaxis (PCA)	ImmunoCAP Test
Skin Test	Microarray
	Radio Immunoassay
	RAST
	Western/Immunoblot (Reference/s)

Isoallergen/Variant for Lit v 3:

Available

Isoallergen/Variant	Common Name	GenBank Nucleotide	NCBI Protein (GenPept)	UniProtKB	RCSB-PDB (Click on the PDB id to view structure)	ETR (Evolutionary Trace analysis Report)
Lit v 3.0101	Myosin light chain	EU449515.1 (View Sequence)	ACC76803.1 (View Sequence)	B7SNI3 (View Sequence)	-	-

Sequence Analysis

BLAST Nucleotide/Protein sequence of Allergen Lit v 3 with Nucleotide or Protein sequences in AllerBase:
Select GenBank or UniprotKB accession number by clicking on the checkbox in the above table

Default E-value cut-off for BLAST is set at 0.01.

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Align Nucleotode/Protein sequence of Your choice with Nucleotode or Protein sequence of Allergen Lit v 3: (Alignment job will be redirected to EMBL-EMBOSS Water or Needle tool)

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Cross-links to Allergen Databases

IgE Epitope Data

Allergen	Isoallergen / Isoform	Epitope	Type of Epitope	Sequence Position	View on Structure	IEDB	Antibody Used	IMGT	AgAbDb Link	Nature of Epitope	Assay	Reference	Comment
Lit v 3	Lit v 3.0101	RSKKSGGGSNVFDMFTQR	Sequential / Linear	13-30	-	179456	IgE from serum of Shrimp allergic patients	-	-	-	Microarray	20471069	-
Lit v 3	Lit v 3.0101	VFDMFTQRQVAEFKEGFQLMDRDKDG	Sequential / Linear	22-48	-	179323	IgE from serum of Shrimp allergic patients	-	-	-	Microarray	20471069	-
Lit v 3	Lit v 3.0101	VIGKTDLRGTFDEIGRIA	Sequential / Linear	49-66	-	179629	IgE from serum of Shrimp allergic patients	-	-	-	Microarray	20471069	-
Lit v 3	Lit v 3.0101	TFDEIGRIATDQELDEMLADAPAPINFTMLLNM	Sequential / Linear	58-90	-	179562	IgE from serum of Shrimp allergic patients	-	-	-	Microarray	20471069	-
Lit v 3	Lit v 3.0101	PAPINFTMLLNMFAERQTGES	Sequential / Linear	79-99	-	-	IgE from serum of Shrimp allergic patients	-	-	-	Microarray	20471069	-
Lit v 3	Lit v 3.0101	NIDCDTFRHALMTWGDKFSSQEAD	Sequential / Linear	118-141	-	179301	IgE from serum of Shrimp allergic patients	-	-	-	Microarray	20471069	-

IgE Antibody Data

No IgE Antibody Data Available

Cross-reactivity Data

Allergen	Cross-reactive Allergens	Reference
Lit v 3	Cra c 5 (View AllerBase Entry) Pro c 5 (View AllerBase Entry) Pen m 3 (View AllerBase Entry)	32088402