Database of 2313 Experimentally Validated Allergens

Data for Cup s 1
WHO/IUIS recognized Allergen

0  1  1  0  1  0  0  0  1 
Completeness Index: Denotes availibility of data for the allergen in Binary format
1: data available
0: data not available
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AllerBase IDAB_P_00621Allergen NameCup s 1
Source OrganismCupressus sempervirens (Cypress)KingdomPlant
Biological Function/RolePectate lyaseMode of ExposureInhalation

Assays/Methods used for Experimental Characterization (Read More)

  :  Data Available    : Data not Available

Biological assay / test IgE assay / test Physicochemical test Cell-based assay
Basophil/Mast cell/Histamine Test EAST Chromatography  (Reference/s)Lymphocyte proliferation assay 
Bronchial Test ELISA  (Reference/s)Isoelectrofocusing 
Conjunctival Test Crossed immunoelectrophoresis Mass spectrometry (MS)  (Reference/s)
Nasal Test Fluorescence Immunoassay N-terminal sequencing/sequence analysis 
Oral Test Immunochemiluminescent assay 
Passive Cutaneous Anaphylaxis (PCA) ImmunoCAP Test 
Skin Test Microarray  (Reference/s)
Radio Immunoassay 
Western/Immunoblot  (Reference/s)

Isoallergen/Variant for Cup s 1:Available

Isoallergen/Variant Common Name GenBank Nucleotide NCBI Protein (GenPept) UniProtKB RCSB-PDB (Click on the PDB id to view structure) ETR (Evolutionary Trace analysis Report)
Cup s 1.0101Pectate lyase
AF257491.1  (View Sequence)AAF72625.1  (View Sequence)Q9M4S6  (View Sequence)
Cup s 1.0102Pectate lyaseAF257492.1  (View Sequence)AAF72626.1  (View Sequence)Q9M4S5  (View Sequence)
Cup s 1.0103Pectate lyaseAF257493.1  (View Sequence)AAF72627.1  (View Sequence)Q9M4S4  (View Sequence)
Cup s 1.0104Pectate lyaseAF257494.1  (View Sequence)AAF72628.1  (View Sequence)Q9M4S3  (View Sequence)
Cup s 1.0105Pectate lyaseAF257495.1  (View Sequence)AAF72629.1  (View Sequence)Q9M4S2  (View Sequence)

Sequence Analysis

  • Pairwise alignment
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  • BLAST Nucleotide/Protein sequence of Allergen Cup s 1 with Nucleotide or Protein sequences in AllerBase:
    Select GenBank or UniprotKB accession number by clicking on the checkbox in the above table  

    Default E-value cut-off for BLAST is set at 0.01.

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  • Align Nucleotode/Protein sequence of Your choice with Nucleotode or Protein sequence of Allergen Cup s 1:  (Alignment job will be redirected to EMBL-EMBOSS Water or Needle tool)


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Cross-links to Allergen Databases


IgE Epitope Data

No Epitope Data Available

IgE Antibody Data

No IgE Antibody Data Available

Cross-reactivity Data

Allergen Cross-reactive Allergens Reference
Cup s 1Cry j 1  (View AllerBase Entry)
Jun a 1  (View AllerBase Entry)