Database of 2233 Experimentally Validated Allergens


Help

Availability:
   AllerBase can be accessed from http://bioinfo.net.in/AllerBase/Home.html

Also See: Databases/Resources/Tools integrated in AllerBase

Home Page




Search and Browse Options

Navigation for Search:
  AllerBase provides Basic and Advanced Search utilities to search the database.



Navigation for Browse:  Users can browse the database by Allergens, IgE Epitopes and IgE Antibodies




Basic Search Utilities:

Search for Allergens:




Basic Search Result:




AllerBase Sample Entry:



Search for Isoallergens/Isoforms:



Search for IgE Epitopes:



Search for Cross-reactive Allergens:



Search for IgE Antibody:



Advanced Search Utilities:

Advanced search for allergens by using taxonomic level and two search parameters:



Advanced search for allergens by using source organism and two search parameters:



Search for Sequential/Discontinuous Epitopes:



Search for Major/Immunodominant/Minor or Strong/Moderate/Weakly binding Epitopes:




Perform BLAST Search with Your Sequence against AllerBase Nucleotide/Protein Sequences:




Perform BLAST Search with Allergen Sequence against AllerBase Nucleotide/Protein Sequences:




Perform Pairwise Sequence Alignment of Your Sequence with the Allergen Sequence:




Perform Multiple Sequence Alignment of BLAST Hits using MUSCLE :



Databases/Resources/Tools integrated in AllerBase:

1. GenBank and GenPept
2. UniprotKB
3. RCSB-PDB
4. Evolutionary Trace Analysis
5. NCBI-BLAST
6. MUSCLE
7. EMBL-EMBOSS Water and Needle
8. PubMed
9. WHO/IUIS-Allergen Database
10. Allergome Database
11. AllFam Database
12. Immune Epitope Database (IEDB)
13. IMGT-3D Structure Database
14. AgAbDb Database
15. IMGT-LIGM Database