Antibody-specific Epitope Prediction Server


Compilation of datasets :
  • The datasets used to develop AbCPE are compiled from the Immune Epitope Database (IEDB).
  • Sequential (linear) B-cell epitopes binding to four antibody classes viz. IgG, IgE, IgA and IgM (excluding IgD) are extracted using Perl scripts and divided into four labels.
  • Epitopes that bind to more than one class of antibodies are also extracted using specifically written Perl scripts and assigned specific binary notation.
  • Linear antibody binding epitopes from novel coronavirus (SARS-CoV-2), with Human as host organism, are also extracted from the IEDB.
  • The final dataset and SARS-CoV-2 test dataset consist of 10744 and 176 epitopes respectively.
Links to datasets for download:
Dataset SARS-CoV-2 test dataset
IgA_Epitopes IgG-SARS-CoV-2
IgE_Epitopes IgA-SARS-CoV-2
IgE+IgA_Epitopes IgM-SARS-CoV-2
IgG_Epitopes IgG+IgM-SARS-CoV-2
IgG+IgA_Epitopes
IgG+IgE_Epitopes
IgG+IgE+IgA_Epitopes
IgG+IgM_Epitopes
IgG+IgM+IgA_Epitopes
IgG+IgM+IgE_Epitopes
IgM_Epitopes